Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC026316.1-201ENST00000398900 414 ntBASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 NOC2LP1-201ENST00000450578 752 ntBASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC103691.2-201ENST00000618824 433 ntBASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC006453.1-201ENST00000636037 1257 ntBASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 OR6D1P-202ENST00000641007 5290 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 CLUHP2-201ENST00000426660 1303 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 MIR648-201ENST00000385046 94 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ISCA2P1-201ENST00000425548 448 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 KRT18P66-201ENST00000452970 1269 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 TUBB8P8-201ENST00000458717 1058 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 AC022616.1-201ENST00000518688 554 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 MIR4683-201ENST00000579659 81 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 AC138466.3-201ENST00000619983 221 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 AL162426.1-201ENST00000624141 743 ntBASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXXC1Q9P0U4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 AL160314.3-201ENST00000556041 767 ntBASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 AC242376.1-201ENST00000559033 726 ntBASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 AC005324.6-201ENST00000587972 613 ntBASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 AC090164.2-201ENST00000611487 516 ntBASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 AL805961.1-201ENST00000642026 753 ntBASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 FLJ38576-201ENST00000623820 2459 ntBASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXXC1Q9P0U4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms