Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 AC105917.1-201ENST00000506637 2539 ntBASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PARPBPQ9NWS1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 AC018892.3-201ENST00000623986 2499 ntBASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 AP005117.1-202ENST00000581724 1908 ntBASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PARPBPQ9NWS1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 BCRP1-201ENST00000444246 691 ntBASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 AC092364.2-202ENST00000597012 1073 ntBASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 AC097359.3-201ENST00000603982 1210 ntBASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PARPBPQ9NWS1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 MEP1AP4-201ENST00000423244 1087 ntBASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 FAM8A3P-201ENST00000427218 844 ntBASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 MIR4313-201ENST00000580760 101 ntBASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PARPBPQ9NWS1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms