Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AC245100.3-201ENST00000441281 285 ntBASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AC092337.1-201ENST00000568699 1129 ntBASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.13■□□□□ 0.01
CUEDC1Q9NWM3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 GNAQP1-201ENST00000444815 1067 ntBASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CUEDC1Q9NWM3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms