Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 AL391005.1-201ENST00000623953 2435 ntBASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 C2orf69P2-201ENST00000562032 1123 ntBASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FBXO28Q9NVF7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
FBXO28Q9NVF7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.77■□□□□ 0.43
FBXO28Q9NVF7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FBXO28Q9NVF7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
FBXO28Q9NVF7 PCDHA1-201ENST00000378133 2726 ntBASIC17.77■□□□□ 0.43
FBXO28Q9NVF7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FBXO28Q9NVF7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AL139094.1-201ENST00000405549 1188 ntBASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 PFN1P12-201ENST00000455938 534 ntBASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AC004066.1-201ENST00000502488 802 ntBASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AC243960.2-201ENST00000600996 747 ntBASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FBXO28Q9NVF7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 NUS1P3-201ENST00000423502 862 ntBASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 AL606495.2-201ENST00000605867 535 ntBASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 AL118558.3-201ENST00000607414 1079 ntBASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FBXO28Q9NVF7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 335.9 ms