Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 AF238378.1-201ENST00000526806 358 ntBASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 AC021087.4-201ENST00000563761 564 ntBASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 AC025062.2-201ENST00000605477 670 ntBASIC14.28□□□□□ -0.12
HMG20AQ9NP66 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMG20AQ9NP66 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 LAGE3P1-201ENST00000425356 484 ntBASIC14.27□□□□□ -0.13
HMG20AQ9NP66 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 AC006557.2-201ENST00000592985 1240 ntBASIC14.27□□□□□ -0.13
HMG20AQ9NP66 CLEC4GP1-201ENST00000596555 870 ntBASIC14.27□□□□□ -0.13
HMG20AQ9NP66 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HMG20AQ9NP66 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 ZBED1P1-201ENST00000502364 1930 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AC011477.6-201ENST00000604980 1927 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AC087163.2-201ENST00000457299 853 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 IFNL4P1-201ENST00000607083 540 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AC020765.3-201ENST00000613051 740 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms