Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AC015922.1-201ENST00000421102 1152 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 RPL13P2-201ENST00000440687 659 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 SDHAP3-202ENST00000515467 728 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AC027369.6-201ENST00000525520 931 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AC015910.1-201ENST00000579400 975 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AL158211.3-201ENST00000607385 239 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AC093028.1-201ENST00000622998 982 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 AC099063.4-201ENST00000641099 1602 ntBASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC40Q9H9A6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 AL133267.1-201ENST00000398220 340 ntBASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 KRT18P64-201ENST00000434946 1219 ntBASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 AC087499.5-201ENST00000452760 1342 ntBASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC40Q9H9A6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 AGAP7P-201ENST00000582299 2062 ntBASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 AGAP14-201ENST00000624701 2060 ntBASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms