Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AL365203.3-201ENST00000609742 2057 ntBASIC18.11■□□□□ 0.49
SH2D4AQ9H788 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH2D4AQ9H788 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 TUBB1P2-201ENST00000422712 1306 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 TUBB1P1-201ENST00000503144 1300 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 NUS1P3-201ENST00000423502 862 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 YBX1P6-201ENST00000442962 1002 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 AL583810.1-201ENST00000553344 1045 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 AC025181.2-201ENST00000606994 802 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 AC112504.1-201ENST00000623415 1841 ntBASIC18.09■□□□□ 0.49
SH2D4AQ9H788 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH2D4AQ9H788 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.08■□□□□ 0.49
SH2D4AQ9H788 KRT8P35-201ENST00000483942 1338 ntBASIC18.08■□□□□ 0.49
SH2D4AQ9H788 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 AL355994.2-201ENST00000447882 704 ntBASIC18.08■□□□□ 0.48
SH2D4AQ9H788 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 AC025279.2-201ENST00000569730 653 ntBASIC18.08■□□□□ 0.48
SH2D4AQ9H788 GNRHR2-203ENST00000581100 1187 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms