Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AC148477.4-201ENST00000613430 1793 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 REXO1L6P-201ENST00000603433 1515 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 KLF2P2-201ENST00000416807 1039 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 C2orf27AP3-201ENST00000434123 579 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 FO681548.1-201ENST00000455617 1132 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AC025279.2-201ENST00000569730 653 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AL354718.3-201ENST00000616414 581 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 CR382287.1-201ENST00000623954 586 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 AL138709.1-201ENST00000614840 1693 ntBASIC16.72■□□□□ 0.27
NXF3Q9H4D5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 AC026954.1-201ENST00000429771 1293 ntBASIC16.71■□□□□ 0.27
NXF3Q9H4D5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 AC007787.1-201ENST00000588095 1583 ntBASIC16.71■□□□□ 0.27
NXF3Q9H4D5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NXF3Q9H4D5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.7■□□□□ 0.26
NXF3Q9H4D5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms