Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 FGFR3P5-201ENST00000564496 886 ntBASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 BNIP3P13-201ENST00000599968 566 ntBASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 AC026740.1-201ENST00000607068 791 ntBASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 AC100757.4-201ENST00000626934 759 ntBASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 AP000593.2-201ENST00000542775 1433 ntBASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCDH11YQ9BZA8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 AC024681.1-201ENST00000521917 487 ntBASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 RN7SL574P-201ENST00000581512 297 ntBASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 MIR4706-201ENST00000582134 82 ntBASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 AC008132.1-202ENST00000342005 1389 ntBASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDH11YQ9BZA8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 ACTG1P2-201ENST00000415776 1125 ntBASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 ACTG1P11-201ENST00000425411 1125 ntBASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH11YQ9BZA8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 Z97180.1-201ENST00000445173 988 ntBASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 RNMTL1P1-201ENST00000454103 560 ntBASIC19.86■□□□□ 0.77
PCDH11YQ9BZA8 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms