Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 TOMM22P5-201ENST00000416399 439 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 COX5BP8-201ENST00000416911 349 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 NME2P1-201ENST00000426182 414 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 RN7SL752P-201ENST00000463779 287 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 RN7SL399P-201ENST00000471648 279 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 WASH4P-201ENST00000564273 1246 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 AL161772.1-201ENST00000610494 4412 ntBASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 KRT18P64-201ENST00000434946 1219 ntBASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP3Q9BWW4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms