Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SHANK2-AS3Q9BTD1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 MKNK2P1-201ENST00000437526 628 ntBASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SHANK2-AS3Q9BTD1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms