Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 AC005912.2-201ENST00000619492 2400 ntBASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 AC106730.1-201ENST00000566722 1090 ntBASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 AC026120.1-201ENST00000611536 926 ntBASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HDHD3Q9BSH5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 AL359258.3-201ENST00000622910 2331 ntBASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
HDHD3Q9BSH5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms