Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ARID3AQ99856 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.9■□□□□ 0.46
ARID3AQ99856 AC145098.2-201ENST00000623593 3026 ntBASIC17.9■□□□□ 0.46
ARID3AQ99856 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARID3AQ99856 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARID3AQ99856 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.9■□□□□ 0.46
ARID3AQ99856 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
ARID3AQ99856 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.89■□□□□ 0.46
ARID3AQ99856 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.89■□□□□ 0.46
ARID3AQ99856 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ARID3AQ99856 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ARID3AQ99856 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.89■□□□□ 0.45
ARID3AQ99856 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ARID3AQ99856 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.89■□□□□ 0.45
ARID3AQ99856 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ARID3AQ99856 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 PGAM5P1-201ENST00000518923 814 ntBASIC17.89■□□□□ 0.45
ARID3AQ99856 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ARID3AQ99856 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
ARID3AQ99856 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ARID3AQ99856 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.89■□□□□ 0.45
ARID3AQ99856 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ARID3AQ99856 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ARID3AQ99856 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 ME2P1-201ENST00000426028 1970 ntBASIC17.88■□□□□ 0.45
ARID3AQ99856 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 GGT3P-204ENST00000453783 1664 ntBASIC17.88■□□□□ 0.45
ARID3AQ99856 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.88■□□□□ 0.45
ARID3AQ99856 PDPK2P-202ENST00000562415 1191 ntBASIC17.88■□□□□ 0.45
ARID3AQ99856 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.88■□□□□ 0.45
ARID3AQ99856 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ARID3AQ99856 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.88■□□□□ 0.45
ARID3AQ99856 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ARID3AQ99856 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ARID3AQ99856 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms