Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.76■□□□□ 0.59
EYA3Q99504 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.76■□□□□ 0.59
EYA3Q99504 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.76■□□□□ 0.59
EYA3Q99504 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.76■□□□□ 0.59
EYA3Q99504 HIST2H2BC-201ENST00000498492 580 ntBASIC18.76■□□□□ 0.59
EYA3Q99504 COX5BP1-201ENST00000507622 393 ntBASIC18.76■□□□□ 0.59
EYA3Q99504 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 RN7SL190P-201ENST00000582519 257 ntBASIC18.76■□□□□ 0.59
EYA3Q99504 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
EYA3Q99504 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EYA3Q99504 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
EYA3Q99504 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.75■□□□□ 0.59
EYA3Q99504 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.75■□□□□ 0.59
EYA3Q99504 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.75■□□□□ 0.59
EYA3Q99504 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.75■□□□□ 0.59
EYA3Q99504 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.75■□□□□ 0.59
EYA3Q99504 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
EYA3Q99504 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 AC006449.5-201ENST00000610658 2098 ntBASIC18.75■□□□□ 0.59
EYA3Q99504 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EYA3Q99504 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EYA3Q99504 AL158070.2-201ENST00000623713 1621 ntBASIC18.74■□□□□ 0.59
EYA3Q99504 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EYA3Q99504 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.74■□□□□ 0.59
EYA3Q99504 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.74■□□□□ 0.59
EYA3Q99504 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.74■□□□□ 0.59
EYA3Q99504 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 AL451050.2-201ENST00000606967 682 ntBASIC18.74■□□□□ 0.59
EYA3Q99504 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EYA3Q99504 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.74■□□□□ 0.59
EYA3Q99504 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EYA3Q99504 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.74■□□□□ 0.59
EYA3Q99504 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EYA3Q99504 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms