Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 BX276092.5-203ENST00000456199 560 ntBASIC14.74□□□□□ -0.05
NR1H4Q96RI1 KRT8P26-201ENST00000534154 1276 ntBASIC14.74□□□□□ -0.05
NR1H4Q96RI1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 AL353801.3-201ENST00000609898 542 ntBASIC14.74□□□□□ -0.05
NR1H4Q96RI1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.74□□□□□ -0.05
NR1H4Q96RI1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 AL160237.2-201ENST00000556165 472 ntBASIC14.73□□□□□ -0.05
NR1H4Q96RI1 AL136038.3-201ENST00000561909 1096 ntBASIC14.73□□□□□ -0.05
NR1H4Q96RI1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H4Q96RI1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AC130686.1-201ENST00000622936 2466 ntBASIC14.72□□□□□ -0.05
NR1H4Q96RI1 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms