Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH3Q96II8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH3Q96II8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH3Q96II8 DPM3-202ENST00000368399 517 ntBASIC16.77■□□□□ 0.28
LRCH3Q96II8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 RBM8B-201ENST00000555532 525 ntBASIC16.77■□□□□ 0.28
LRCH3Q96II8 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 AC015910.1-201ENST00000579400 975 ntBASIC16.77■□□□□ 0.28
LRCH3Q96II8 RN7SL718P-201ENST00000581254 303 ntBASIC16.77■□□□□ 0.28
LRCH3Q96II8 RN7SL713P-201ENST00000582127 302 ntBASIC16.77■□□□□ 0.28
LRCH3Q96II8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 AC138466.4-201ENST00000623965 852 ntBASIC16.77■□□□□ 0.28
LRCH3Q96II8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH3Q96II8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH3Q96II8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH3Q96II8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH3Q96II8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH3Q96II8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH3Q96II8 AC092171.3-201ENST00000610122 2651 ntBASIC16.77■□□□□ 0.27
LRCH3Q96II8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.77■□□□□ 0.27
LRCH3Q96II8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.77■□□□□ 0.27
LRCH3Q96II8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH3Q96II8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH3Q96II8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH3Q96II8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 AC008741.2-201ENST00000612792 3115 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 AC004987.2-201ENST00000395959 1148 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 RPL18P13-201ENST00000478088 569 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 IGHV3-37-201ENST00000518544 340 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 AC000095.1-201ENST00000603208 874 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 AL805961.1-203ENST00000641078 1258 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 PRSS30P-206ENST00000641773 873 ntBASIC16.76■□□□□ 0.27
LRCH3Q96II8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRCH3Q96II8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH3Q96II8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 GPAA1P2-202ENST00000606848 1787 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 LINC02199-201ENST00000506655 2702 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 TPM3P8-201ENST00000330554 643 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms