Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 AC009477.1-201ENST00000452936 217 ntBASIC16.14■□□□□ 0.17
IFT43Q96FT9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SERBP1P5-201ENST00000510079 1181 ntBASIC16.14■□□□□ 0.17
IFT43Q96FT9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 AL133215.2-201ENST00000609242 977 ntBASIC16.14■□□□□ 0.17
IFT43Q96FT9 AC012645.4-201ENST00000610691 1061 ntBASIC16.14■□□□□ 0.17
IFT43Q96FT9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 ZNF890P-202ENST00000530367 1156 ntBASIC16.13■□□□□ 0.17
IFT43Q96FT9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 TEX28P1-201ENST00000613479 1221 ntBASIC16.13■□□□□ 0.17
IFT43Q96FT9 TEX28P2-201ENST00000617764 1221 ntBASIC16.13■□□□□ 0.17
IFT43Q96FT9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 AC018892.3-201ENST00000623986 2499 ntBASIC16.13■□□□□ 0.17
IFT43Q96FT9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.13■□□□□ 0.17
IFT43Q96FT9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.13■□□□□ 0.17
IFT43Q96FT9 AC026748.1-201ENST00000624349 3251 ntBASIC16.13■□□□□ 0.17
IFT43Q96FT9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT43Q96FT9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms