Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 RPSAP31-201ENST00000416648 895 ntBASIC17.94■□□□□ 0.46
CDCA5Q96FF9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 RPL13AP19-201ENST00000434320 584 ntBASIC17.94■□□□□ 0.46
CDCA5Q96FF9 RPL18P13-201ENST00000478088 569 ntBASIC17.94■□□□□ 0.46
CDCA5Q96FF9 AC090857.1-201ENST00000527400 390 ntBASIC17.94■□□□□ 0.46
CDCA5Q96FF9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 FLJ38576-201ENST00000623820 2459 ntBASIC17.94■□□□□ 0.46
CDCA5Q96FF9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA5Q96FF9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AC073150.1-201ENST00000450406 1084 ntBASIC17.93■□□□□ 0.46
CDCA5Q96FF9 RN7SL8P-201ENST00000461771 266 ntBASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 SNORD3B-2-202ENST00000571722 791 ntBASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 AC087045.2-201ENST00000606279 1003 ntBASIC17.93■□□□□ 0.46
CDCA5Q96FF9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 FKBP4P6-201ENST00000457486 1332 ntBASIC17.93■□□□□ 0.46
CDCA5Q96FF9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA5Q96FF9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.92■□□□□ 0.46
CDCA5Q96FF9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 MIR4754-201ENST00000582477 89 ntBASIC17.92■□□□□ 0.46
CDCA5Q96FF9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 NAP1L6-202ENST00000641404 1222 ntBASIC17.92■□□□□ 0.46
CDCA5Q96FF9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 AC005332.8-201ENST00000622750 2735 ntBASIC17.92■□□□□ 0.46
CDCA5Q96FF9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDCA5Q96FF9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms