Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF34Q969K3 AC127383.1-201ENST00000444697 1800 ntBASIC16.34■□□□□ 0.21
RNF34Q969K3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF34Q969K3 MIR661-201ENST00000384842 89 ntBASIC16.34■□□□□ 0.21
RNF34Q969K3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.34■□□□□ 0.21
RNF34Q969K3 SPTLC1P1-201ENST00000447199 261 ntBASIC16.34■□□□□ 0.21
RNF34Q969K3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF34Q969K3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF34Q969K3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF34Q969K3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RNF34Q969K3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF34Q969K3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF34Q969K3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF34Q969K3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
RNF34Q969K3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF34Q969K3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 AC138761.1-201ENST00000584393 385 ntBASIC16.33■□□□□ 0.2
RNF34Q969K3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF34Q969K3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF34Q969K3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF34Q969K3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF34Q969K3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF34Q969K3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF34Q969K3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF34Q969K3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.32■□□□□ 0.2
RNF34Q969K3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.32■□□□□ 0.2
RNF34Q969K3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 MEP1AP4-201ENST00000423244 1087 ntBASIC16.32■□□□□ 0.2
RNF34Q969K3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF34Q969K3 AC093004.1-201ENST00000508850 424 ntBASIC16.32■□□□□ 0.2
RNF34Q969K3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF34Q969K3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF34Q969K3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF34Q969K3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF34Q969K3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms