Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AP000344.2-201ENST00000512987 629 ntBASIC14.05□□□□□ -0.16
PTP4A1Q93096 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 RARRES2P9-201ENST00000565168 469 ntBASIC14.05□□□□□ -0.16
PTP4A1Q93096 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.05□□□□□ -0.16
PTP4A1Q93096 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CICP11-201ENST00000434745 2827 ntBASIC14.05□□□□□ -0.16
PTP4A1Q93096 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC254562.1-201ENST00000417586 456 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC005237.2-201ENST00000434368 219 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC069335.1-201ENST00000489972 472 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC022145.2-201ENST00000598203 171 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC004835.2-201ENST00000603762 682 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AL513210.1-201ENST00000629608 234 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AC005252.3-201ENST00000623855 2258 ntBASIC14.04□□□□□ -0.16
PTP4A1Q93096 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
PTP4A1Q93096 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTP4A1Q93096 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTP4A1Q93096 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTP4A1Q93096 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTP4A1Q93096 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTP4A1Q93096 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTP4A1Q93096 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
PTP4A1Q93096 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms