Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC023310.3-201ENST00000557027 670 ntBASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC100756.1-201ENST00000562736 682 ntBASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC138749.3-201ENST00000567691 622 ntBASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC116165.1-201ENST00000611806 668 ntBASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 AC068587.6-202ENST00000641839 5619 ntBASIC14.77□□□□□ -0.04
TM9SF4Q92544 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.77□□□□□ -0.04
TM9SF4Q92544 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF4Q92544 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 AC005622.1-201ENST00000636801 1703 ntBASIC14.77□□□□□ -0.05
TM9SF4Q92544 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TM9SF4Q92544 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF4Q92544 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms