Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.81□□□□□ -0.2
DNAAF1Q8NEP3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.81□□□□□ -0.2
DNAAF1Q8NEP3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DNAAF1Q8NEP3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 BNIP3P1-202ENST00000550043 1585 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AL590627.1-203ENST00000421194 1026 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 FAM86C2P-203ENST00000528684 1004 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AC243562.2-201ENST00000561247 970 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AL513190.1-201ENST00000621254 727 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AC148477.4-201ENST00000613430 1793 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 AC126365.1-201ENST00000578585 1514 ntBASIC13.8□□□□□ -0.2
DNAAF1Q8NEP3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AC117489.1-201ENST00000625169 3217 ntBASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 FDX1P1-201ENST00000449115 551 ntBASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 KRT18P3-201ENST00000451602 1288 ntBASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AC106730.1-201ENST00000566722 1090 ntBASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 AC008267.7-201ENST00000624570 1194 ntBASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 REXO1L1P-202ENST00000608646 1974 ntBASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DNAAF1Q8NEP3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms