Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 EMBP1-201ENST00000458200 901 ntBASIC15.24■□□□□ 0.03
HIPK4Q8NE63 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 AC126365.1-201ENST00000578585 1514 ntBASIC15.23■□□□□ 0.03
HIPK4Q8NE63 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 AC006504.5-208ENST00000588784 2401 ntBASIC15.23■□□□□ 0.03
HIPK4Q8NE63 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 AC108751.1-201ENST00000490852 363 ntBASIC15.23■□□□□ 0.03
HIPK4Q8NE63 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 FAM215A-202ENST00000632077 792 ntBASIC15.23■□□□□ 0.03
HIPK4Q8NE63 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.23■□□□□ 0.03
HIPK4Q8NE63 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.22■□□□□ 0.03
HIPK4Q8NE63 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms