Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 AC004987.2-201ENST00000395959 1148 ntBASIC14.37□□□□□ -0.11
SETD9Q8NE22 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 CXCL1P1-201ENST00000502804 216 ntBASIC14.37□□□□□ -0.11
SETD9Q8NE22 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 AC011467.4-201ENST00000594891 528 ntBASIC14.37□□□□□ -0.11
SETD9Q8NE22 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 AC005252.3-201ENST00000623855 2258 ntBASIC14.37□□□□□ -0.11
SETD9Q8NE22 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
SETD9Q8NE22 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 REXO1L2P-201ENST00000425429 2069 ntBASIC14.37□□□□□ -0.11
SETD9Q8NE22 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SETD9Q8NE22 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC015656.1-201ENST00000624209 3578 ntBASIC14.36□□□□□ -0.11
SETD9Q8NE22 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AL513480.1-201ENST00000451731 511 ntBASIC14.36□□□□□ -0.11
SETD9Q8NE22 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 NPAP1P7-201ENST00000613027 823 ntBASIC14.36□□□□□ -0.11
SETD9Q8NE22 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC113367.3-201ENST00000508316 1912 ntBASIC14.36□□□□□ -0.11
SETD9Q8NE22 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 AC092135.3-201ENST00000624151 1846 ntBASIC14.36□□□□□ -0.11
SETD9Q8NE22 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SETD9Q8NE22 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.36□□□□□ -0.11
SETD9Q8NE22 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms