Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB42Q8N4Z0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AL121723.1-201ENST00000445194 1519 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC236430.1-201ENST00000402231 743 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PIN1P1-201ENST00000412108 996 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 KRT18P64-201ENST00000434946 1219 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC002472.2-201ENST00000442739 958 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 SPDYE18-201ENST00000510091 1050 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 AC020658.6-201ENST00000623564 1870 ntBASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB42Q8N4Z0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AC007541.1-201ENST00000570282 1469 ntBASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms