Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AC079776.1-201ENST00000401540 1152 ntBASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 TTTY23B-201ENST00000442790 549 ntBASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AC093433.1-201ENST00000458048 571 ntBASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AP001063.1-201ENST00000568332 529 ntBASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AC106886.1-201ENST00000568660 600 ntBASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AC015936.2-201ENST00000593177 259 ntBASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ARHGEF39Q8N4T4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 KRT8P44-201ENST00000441609 1350 ntBASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 GHSR-202ENST00000427970 912 ntBASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AC022137.2-201ENST00000503482 481 ntBASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 AC007787.1-201ENST00000588095 1583 ntBASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 PKD1P5-201ENST00000532415 10291 ntBASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ARHGEF39Q8N4T4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
ARHGEF39Q8N4T4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms