Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 AL365203.3-201ENST00000609742 2057 ntBASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 KRT8P35-201ENST00000483942 1338 ntBASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SLC25A24P2-201ENST00000415059 510 ntBASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 AC006453.4-201ENST00000636949 1252 ntBASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 AL138709.1-201ENST00000614840 1693 ntBASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 ELK2AP-201ENST00000392510 1007 ntBASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 BX539320.1-201ENST00000623759 877 ntBASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AL138799.1-201ENST00000448213 1675 ntBASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 AC138028.6-201ENST00000616106 1482 ntBASIC15.78■□□□□ 0.12
SYNPOQ8N3V7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms