Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 CETN4P-206ENST00000642099 2168 ntBASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 SPDYE7P-202ENST00000420373 878 ntBASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 FLJ16779-201ENST00000612722 7638 ntBASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AJ011931.1-201ENST00000618749 2492 ntBASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC83Q8IWF9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC83Q8IWF9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 RPL37AP1-201ENST00000412502 279 ntBASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 AP006288.1-201ENST00000446065 395 ntBASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 AC109322.1-201ENST00000524499 1264 ntBASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 LINC00628-201ENST00000628516 1289 ntBASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC83Q8IWF9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms