Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CRLF3Q8IUI8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC139749.1-202ENST00000617529 3139 ntBASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC023024.2-201ENST00000623561 1993 ntBASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC018892.3-201ENST00000623986 2499 ntBASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 ACTG1P14-201ENST00000446382 1122 ntBASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC109635.5-201ENST00000533593 962 ntBASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AC092902.6-201ENST00000641783 218 ntBASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CRLF3Q8IUI8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AC243562.2-201ENST00000561247 970 ntBASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 MIR4313-201ENST00000580760 101 ntBASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
CRLF3Q8IUI8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CRLF3Q8IUI8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
CRLF3Q8IUI8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CRLF3Q8IUI8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms