Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
SCXQ7RTU7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC10.43□□□□□ -0.74
SCXQ7RTU7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.43□□□□□ -0.74
SCXQ7RTU7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SCXQ7RTU7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.43□□□□□ -0.74
SCXQ7RTU7 FOXO1B-201ENST00000504678 1527 ntBASIC10.43□□□□□ -0.74
SCXQ7RTU7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SCXQ7RTU7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC10.42□□□□□ -0.74
SCXQ7RTU7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 MTND6P24-201ENST00000440466 518 ntBASIC10.42□□□□□ -0.74
SCXQ7RTU7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 RNA5SP410-201ENST00000516285 106 ntBASIC10.42□□□□□ -0.74
SCXQ7RTU7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AL138828.2-201ENST00000615812 383 ntBASIC10.42□□□□□ -0.74
SCXQ7RTU7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AL035252.4-201ENST00000624174 288 ntBASIC10.42□□□□□ -0.74
SCXQ7RTU7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SCXQ7RTU7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SCXQ7RTU7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 AL035456.1-201ENST00000456064 1369 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms