Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 WASH6P-202ENST00000359512 1437 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC041040.2-201ENST00000622926 2899 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ACTG1P14-201ENST00000446382 1122 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 DNAJB3-202ENST00000449667 1266 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 MIR3909-201ENST00000579518 119 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC026120.1-201ENST00000611536 926 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC020765.3-201ENST00000613051 740 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 C18orf15-201ENST00000623680 2534 ntBASIC14.49□□□□□ -0.09
TUBA1AQ71U36 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1AQ71U36 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 AC126335.2-201ENST00000623362 4637 ntBASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 SNHG9-202ENST00000564014 471 ntBASIC14.48□□□□□ -0.09
TUBA1AQ71U36 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms