Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 KRT8P14-201ENST00000414254 1442 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 IGHEP1-201ENST00000521393 651 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 AP000911.2-201ENST00000534330 502 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 PHBP15-201ENST00000574228 665 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 MIR3677-201ENST00000578964 60 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 AL353622.2-201ENST00000605846 425 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 AL627230.2-201ENST00000613254 655 ntBASIC14.87□□□□□ -0.03
RIF1Q5UIP0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIF1Q5UIP0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AC004554.1-201ENST00000422830 1468 ntBASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 MIR557-201ENST00000385239 98 ntBASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AL135901.1-201ENST00000451812 333 ntBASIC14.86□□□□□ -0.03
RIF1Q5UIP0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AC136759.1-202ENST00000530858 2194 ntBASIC14.86□□□□□ -0.03
RIF1Q5UIP0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIF1Q5UIP0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms