Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 KRT17P4-201ENST00000429445 819 ntBASIC13.27□□□□□ -0.29
LRRK2Q5S007 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 IL9RP3-201ENST00000442856 1674 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC136759.1-202ENST00000530858 2194 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 NEFHP1-201ENST00000412845 2629 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 RN7SKP175-201ENST00000408472 289 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 RN7SL258P-201ENST00000478664 300 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 SNORD3B-2-202ENST00000571722 791 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC002472.4-201ENST00000641915 272 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 TSPY25P-201ENST00000429463 745 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 HNRNPA1P42-201ENST00000458678 957 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRK2Q5S007 AC026803.1-201ENST00000569130 274 ntBASIC13.26□□□□□ -0.29
LRRK2Q5S007 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.26□□□□□ -0.29
LRRK2Q5S007 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 AC239868.1-201ENST00000369385 493 ntBASIC13.25□□□□□ -0.29
LRRK2Q5S007 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 VDAC1P1-201ENST00000439229 848 ntBASIC13.25□□□□□ -0.29
LRRK2Q5S007 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 MIR3677-201ENST00000578964 60 ntBASIC13.25□□□□□ -0.29
LRRK2Q5S007 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 AC006548.2-201ENST00000605217 529 ntBASIC13.25□□□□□ -0.29
LRRK2Q5S007 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 HMGB1P24-201ENST00000611897 328 ntBASIC13.25□□□□□ -0.29
LRRK2Q5S007 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms