Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 AC093520.2-201ENST00000561830 333 ntBASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 RN7SL828P-201ENST00000607615 303 ntBASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AZGP1P1-201ENST00000411909 902 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 CNN2P11-201ENST00000429351 262 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 SPDYE14P-201ENST00000442619 822 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AP001059.3-201ENST00000619053 235 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AC079781.4-201ENST00000641908 219 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 ST20-AS1-201ENST00000560255 4223 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AC023157.3-201ENST00000619086 2088 ntBASIC10.36□□□□□ -0.75
SYCNQ0VAF6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SYCNQ0VAF6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms