Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.04□□□□□ -0.48
HIST1H1AQ02539 PTENP1-202ENST00000532280 3996 ntBASIC12.03□□□□□ -0.48
HIST1H1AQ02539 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 AL355306.1-201ENST00000415580 579 ntBASIC12.03□□□□□ -0.48
HIST1H1AQ02539 RNA5SP410-201ENST00000516285 106 ntBASIC12.03□□□□□ -0.48
HIST1H1AQ02539 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 SPTSSB-204ENST00000617024 1292 ntBASIC12.03□□□□□ -0.48
HIST1H1AQ02539 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 LINC01101-201ENST00000622953 1884 ntBASIC12.03□□□□□ -0.48
HIST1H1AQ02539 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 AKAP8P1-201ENST00000434743 1349 ntBASIC12.03□□□□□ -0.48
HIST1H1AQ02539 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1AQ02539 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
HIST1H1AQ02539 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 TFAMP1-201ENST00000412727 736 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 RN7SL589P-201ENST00000481268 310 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 FAM86C2P-203ENST00000528684 1004 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC243562.2-201ENST00000561247 970 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC027307.2-201ENST00000591252 911 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms