Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.19■□□□□ 0.5
IRX3P78415 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.19■□□□□ 0.5
IRX3P78415 BCYRN1-201ENST00000418539 200 ntBASIC18.19■□□□□ 0.5
IRX3P78415 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.19■□□□□ 0.5
IRX3P78415 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.19■□□□□ 0.5
IRX3P78415 AC099548.2-209ENST00000480264 625 ntBASIC18.19■□□□□ 0.5
IRX3P78415 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.19■□□□□ 0.5
IRX3P78415 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 KRT90P-201ENST00000549264 1064 ntBASIC18.19■□□□□ 0.5
IRX3P78415 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.19■□□□□ 0.5
IRX3P78415 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.19■□□□□ 0.5
IRX3P78415 AC244093.1-201ENST00000610837 814 ntBASIC18.19■□□□□ 0.5
IRX3P78415 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.19■□□□□ 0.5
IRX3P78415 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 RHOXF1P1-202ENST00000635473 501 ntBASIC18.19■□□□□ 0.5
IRX3P78415 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.19■□□□□ 0.5
IRX3P78415 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 ALOX12P2-203ENST00000570921 1945 ntBASIC18.19■□□□□ 0.5
IRX3P78415 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.19■□□□□ 0.5
IRX3P78415 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.18■□□□□ 0.5
IRX3P78415 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.18■□□□□ 0.5
IRX3P78415 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
IRX3P78415 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.18■□□□□ 0.5
IRX3P78415 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 AC097359.3-201ENST00000603982 1210 ntBASIC18.18■□□□□ 0.5
IRX3P78415 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 ME2P1-201ENST00000426028 1970 ntBASIC18.18■□□□□ 0.5
IRX3P78415 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.18■□□□□ 0.5
IRX3P78415 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX3P78415 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IRX3P78415 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IRX3P78415 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
IRX3P78415 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IRX3P78415 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IRX3P78415 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
IRX3P78415 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.17■□□□□ 0.5
IRX3P78415 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
IRX3P78415 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.17■□□□□ 0.5
IRX3P78415 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.17■□□□□ 0.5
IRX3P78415 AC026954.1-201ENST00000429771 1293 ntBASIC18.17■□□□□ 0.5
IRX3P78415 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.17■□□□□ 0.5
IRX3P78415 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.17■□□□□ 0.5
IRX3P78415 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.17■□□□□ 0.5
IRX3P78415 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.17■□□□□ 0.5
IRX3P78415 AC084346.2-201ENST00000607097 949 ntBASIC18.17■□□□□ 0.5
IRX3P78415 AC009542.2-202ENST00000619004 1067 ntBASIC18.17■□□□□ 0.5
IRX3P78415 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms