Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 AC241585.1-201ENST00000433527 519 ntBASIC13.64□□□□□ -0.23
HIST1H3AP68431 AC114501.2-201ENST00000439631 535 ntBASIC13.64□□□□□ -0.23
HIST1H3AP68431 KRT18P43-201ENST00000469825 1281 ntBASIC13.64□□□□□ -0.23
HIST1H3AP68431 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 AC092337.1-201ENST00000568699 1129 ntBASIC13.64□□□□□ -0.23
HIST1H3AP68431 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H3AP68431 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H3AP68431 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 BTBD7P1-201ENST00000447253 1453 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MIR943-201ENST00000401286 94 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 GHSR-202ENST00000427970 912 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 DUX4L27-201ENST00000554796 1261 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 MIR600HG-201ENST00000449175 5984 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 AL121723.1-201ENST00000445194 1519 ntBASIC13.63□□□□□ -0.23
HIST1H3AP68431 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H3AP68431 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H3AP68431 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms