Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 AC073389.1-201ENST00000595595 795 ntBASIC17.56■□□□□ 0.4
TPM4P67936 AC148477.8-201ENST00000624298 468 ntBASIC17.56■□□□□ 0.4
TPM4P67936 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 AC007191.1-201ENST00000623179 2995 ntBASIC17.56■□□□□ 0.4
TPM4P67936 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 AC025580.3-201ENST00000617932 1424 ntBASIC17.55■□□□□ 0.4
TPM4P67936 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 WASH3P-207ENST00000560956 1394 ntBASIC17.55■□□□□ 0.4
TPM4P67936 FO538757.1-201ENST00000623083 1397 ntBASIC17.55■□□□□ 0.4
TPM4P67936 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 FAM8A3P-201ENST00000427218 844 ntBASIC17.55■□□□□ 0.4
TPM4P67936 PHKG1P2-201ENST00000457537 863 ntBASIC17.55■□□□□ 0.4
TPM4P67936 AC093909.1-201ENST00000504731 1122 ntBASIC17.55■□□□□ 0.4
TPM4P67936 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 AC012313.10-201ENST00000623509 926 ntBASIC17.55■□□□□ 0.4
TPM4P67936 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TPM4P67936 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM4P67936 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TPM4P67936 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM4P67936 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.54■□□□□ 0.4
TPM4P67936 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM4P67936 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPM4P67936 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.54■□□□□ 0.4
TPM4P67936 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM4P67936 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TPM4P67936 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TPM4P67936 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 AJ011931.1-201ENST00000618749 2492 ntBASIC17.54■□□□□ 0.4
TPM4P67936 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.54■□□□□ 0.4
TPM4P67936 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM4P67936 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.54■□□□□ 0.4
TPM4P67936 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.54■□□□□ 0.4
TPM4P67936 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TPM4P67936 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TPM4P67936 AL773604.1-201ENST00000617417 272 ntBASIC17.54■□□□□ 0.4
TPM4P67936 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TPM4P67936 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM4P67936 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 KRT8P37-201ENST00000451609 1420 ntBASIC17.54■□□□□ 0.4
TPM4P67936 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM4P67936 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms