Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.84□□□□□ -0.03
SKP1P63208 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.84□□□□□ -0.03
SKP1P63208 AL158212.4-201ENST00000624062 1286 ntBASIC14.84□□□□□ -0.03
SKP1P63208 AL358472.5-202ENST00000641448 1267 ntBASIC14.84□□□□□ -0.03
SKP1P63208 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.84□□□□□ -0.03
SKP1P63208 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.84□□□□□ -0.03
SKP1P63208 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.83□□□□□ -0.03
SKP1P63208 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 AC138969.2-201ENST00000532739 9932 ntBASIC14.83□□□□□ -0.03
SKP1P63208 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SKP1P63208 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SKP1P63208 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.83□□□□□ -0.04
SKP1P63208 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SKP1P63208 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SKP1P63208 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.83□□□□□ -0.04
SKP1P63208 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.83□□□□□ -0.04
SKP1P63208 AC190387.1-201ENST00000551683 408 ntBASIC14.83□□□□□ -0.04
SKP1P63208 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.83□□□□□ -0.04
SKP1P63208 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SKP1P63208 AC000095.1-201ENST00000603208 874 ntBASIC14.83□□□□□ -0.04
SKP1P63208 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SKP1P63208 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SKP1P63208 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SKP1P63208 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SKP1P63208 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.83□□□□□ -0.04
SKP1P63208 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.83□□□□□ -0.04
SKP1P63208 AC127383.1-201ENST00000444697 1800 ntBASIC14.82□□□□□ -0.04
SKP1P63208 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SKP1P63208 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.82□□□□□ -0.04
SKP1P63208 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.82□□□□□ -0.04
SKP1P63208 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.82□□□□□ -0.04
SKP1P63208 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.82□□□□□ -0.04
SKP1P63208 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.82□□□□□ -0.04
SKP1P63208 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 AC023310.3-201ENST00000557027 670 ntBASIC14.82□□□□□ -0.04
SKP1P63208 AC100756.1-201ENST00000562736 682 ntBASIC14.82□□□□□ -0.04
SKP1P63208 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.82□□□□□ -0.04
SKP1P63208 AC138749.3-201ENST00000567691 622 ntBASIC14.82□□□□□ -0.04
SKP1P63208 AC116165.1-201ENST00000611806 668 ntBASIC14.82□□□□□ -0.04
SKP1P63208 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.82□□□□□ -0.04
SKP1P63208 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.82□□□□□ -0.04
SKP1P63208 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SKP1P63208 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SKP1P63208 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SKP1P63208 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SKP1P63208 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SKP1P63208 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms