Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.98□□□□□ -0.17
CLRN1P58418 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 IGHV3-42-201ENST00000520410 361 ntBASIC13.98□□□□□ -0.17
CLRN1P58418 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.98□□□□□ -0.17
CLRN1P58418 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.98□□□□□ -0.17
CLRN1P58418 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.98□□□□□ -0.17
CLRN1P58418 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 AC015911.4-201ENST00000588022 1070 ntBASIC13.98□□□□□ -0.17
CLRN1P58418 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
CLRN1P58418 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.98□□□□□ -0.17
CLRN1P58418 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLRN1P58418 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
CLRN1P58418 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.97□□□□□ -0.17
CLRN1P58418 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLRN1P58418 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.97□□□□□ -0.17
CLRN1P58418 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.97□□□□□ -0.17
CLRN1P58418 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 SLED1-202ENST00000512051 380 ntBASIC13.97□□□□□ -0.17
CLRN1P58418 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.97□□□□□ -0.17
CLRN1P58418 AC051619.7-201ENST00000568314 623 ntBASIC13.97□□□□□ -0.17
CLRN1P58418 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.97□□□□□ -0.17
CLRN1P58418 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.97□□□□□ -0.17
CLRN1P58418 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 AC138035.3-201ENST00000622706 2791 ntBASIC13.97□□□□□ -0.17
CLRN1P58418 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.97□□□□□ -0.17
CLRN1P58418 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.97□□□□□ -0.17
CLRN1P58418 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLRN1P58418 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.96□□□□□ -0.17
CLRN1P58418 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLRN1P58418 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLRN1P58418 AL109954.1-202ENST00000564051 2148 ntBASIC13.96□□□□□ -0.17
CLRN1P58418 C18orf15-201ENST00000623680 2534 ntBASIC13.96□□□□□ -0.17
CLRN1P58418 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.96□□□□□ -0.17
CLRN1P58418 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLRN1P58418 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms