Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 AC013268.4-201ENST00000637413 2228 ntBASIC16.03■□□□□ 0.16
ATXN3P54252 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
ATXN3P54252 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.03■□□□□ 0.16
ATXN3P54252 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATXN3P54252 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.03■□□□□ 0.16
ATXN3P54252 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.02■□□□□ 0.16
ATXN3P54252 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
ATXN3P54252 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.02■□□□□ 0.16
ATXN3P54252 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ATXN3P54252 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ATXN3P54252 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.02■□□□□ 0.16
ATXN3P54252 BOLA2P3-201ENST00000404566 256 ntBASIC16.02■□□□□ 0.16
ATXN3P54252 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.02■□□□□ 0.16
ATXN3P54252 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.02■□□□□ 0.16
ATXN3P54252 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 AC104596.2-201ENST00000512793 793 ntBASIC16.02■□□□□ 0.16
ATXN3P54252 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.02■□□□□ 0.16
ATXN3P54252 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.02■□□□□ 0.16
ATXN3P54252 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.02■□□□□ 0.16
ATXN3P54252 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.02■□□□□ 0.16
ATXN3P54252 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.02■□□□□ 0.16
ATXN3P54252 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.02■□□□□ 0.16
ATXN3P54252 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.02■□□□□ 0.16
ATXN3P54252 COX11-210ENST00000639671 696 ntBASIC16.02■□□□□ 0.16
ATXN3P54252 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATXN3P54252 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.02■□□□□ 0.15
ATXN3P54252 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ATXN3P54252 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.02■□□□□ 0.15
ATXN3P54252 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ATXN3P54252 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.02■□□□□ 0.15
ATXN3P54252 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
ATXN3P54252 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ATXN3P54252 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.02■□□□□ 0.15
ATXN3P54252 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATXN3P54252 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.02■□□□□ 0.15
ATXN3P54252 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 KRT8P12-202ENST00000472924 1397 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms