Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.15■□□□□ 0.02
PDX1P52945 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDX1P52945 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.15■□□□□ 0.02
PDX1P52945 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.15■□□□□ 0.02
PDX1P52945 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 MSTO2P-201ENST00000314835 1709 ntBASIC15.14■□□□□ 0.01
PDX1P52945 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
PDX1P52945 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.14■□□□□ 0.01
PDX1P52945 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PDX1P52945 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 AC011270.2-201ENST00000624293 2550 ntBASIC15.14■□□□□ 0.01
PDX1P52945 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 MIR648-201ENST00000385046 94 ntBASIC15.14■□□□□ 0.01
PDX1P52945 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.14■□□□□ 0.01
PDX1P52945 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PDX1P52945 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.14■□□□□ 0.01
PDX1P52945 FAM8A2P-201ENST00000528813 1142 ntBASIC15.14■□□□□ 0.01
PDX1P52945 ENPP7P5-201ENST00000541031 1031 ntBASIC15.14■□□□□ 0.01
PDX1P52945 HNRNPUP1-201ENST00000554987 333 ntBASIC15.14■□□□□ 0.01
PDX1P52945 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.14■□□□□ 0.01
PDX1P52945 AC120045.2-201ENST00000567334 178 ntBASIC15.14■□□□□ 0.01
PDX1P52945 AL049840.4-201ENST00000602422 811 ntBASIC15.14■□□□□ 0.01
PDX1P52945 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 MIR6869-201ENST00000619434 62 ntBASIC15.14■□□□□ 0.01
PDX1P52945 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.14■□□□□ 0.01
PDX1P52945 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PDX1P52945 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 AC134407.2-201ENST00000625089 1978 ntBASIC15.14■□□□□ 0.01
PDX1P52945 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.14■□□□□ 0.01
PDX1P52945 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 AC069224.1-201ENST00000566372 1715 ntBASIC15.14■□□□□ 0.01
PDX1P52945 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.14■□□□□ 0.01
PDX1P52945 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDX1P52945 TUBB1P2-201ENST00000422712 1306 ntBASIC15.14■□□□□ 0.01
PDX1P52945 TUBB1P1-201ENST00000503144 1300 ntBASIC15.14■□□□□ 0.01
PDX1P52945 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PDX1P52945 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.13■□□□□ 0.01
PDX1P52945 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 AC112504.1-201ENST00000623415 1841 ntBASIC15.13■□□□□ 0.01
PDX1P52945 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDX1P52945 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PDX1P52945 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.13■□□□□ 0.01
PDX1P52945 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 AC092933.1-201ENST00000393644 945 ntBASIC15.13■□□□□ 0.01
PDX1P52945 SOCS2P1-201ENST00000417727 557 ntBASIC15.13■□□□□ 0.01
PDX1P52945 AC134915.1-201ENST00000426461 574 ntBASIC15.13■□□□□ 0.01
PDX1P52945 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PDX1P52945 RPL7P3-201ENST00000441388 714 ntBASIC15.13■□□□□ 0.01
PDX1P52945 CSF2RBP1-201ENST00000447905 391 ntBASIC15.13■□□□□ 0.01
PDX1P52945 FO681548.1-201ENST00000455617 1132 ntBASIC15.13■□□□□ 0.01
PDX1P52945 VDAC1P7-201ENST00000462417 847 ntBASIC15.13■□□□□ 0.01
PDX1P52945 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.13■□□□□ 0.01
PDX1P52945 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms