Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN3P51790 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN3P51790 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN3P51790 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CLCN3P51790 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN3P51790 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLCN3P51790 AC008894.3-201ENST00000624324 3103 ntBASIC17.03■□□□□ 0.32
CLCN3P51790 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN3P51790 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN3P51790 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 C2orf27AP3-201ENST00000434123 579 ntBASIC17.03■□□□□ 0.32
CLCN3P51790 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CLCN3P51790 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.03■□□□□ 0.32
CLCN3P51790 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCN3P51790 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCN3P51790 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLCN3P51790 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.03■□□□□ 0.32
CLCN3P51790 AC145423.3-201ENST00000615987 467 ntBASIC17.03■□□□□ 0.32
CLCN3P51790 AL354718.3-201ENST00000616414 581 ntBASIC17.03■□□□□ 0.32
CLCN3P51790 CR382287.1-201ENST00000623954 586 ntBASIC17.03■□□□□ 0.32
CLCN3P51790 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN3P51790 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.03■□□□□ 0.32
CLCN3P51790 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN3P51790 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN3P51790 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN3P51790 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCN3P51790 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN3P51790 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLCN3P51790 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN3P51790 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN3P51790 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCN3P51790 AC026954.1-201ENST00000429771 1293 ntBASIC17.02■□□□□ 0.32
CLCN3P51790 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCN3P51790 FO681548.1-201ENST00000455617 1132 ntBASIC17.02■□□□□ 0.32
CLCN3P51790 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN3P51790 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN3P51790 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN3P51790 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN3P51790 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.02■□□□□ 0.32
CLCN3P51790 AC025279.2-201ENST00000569730 653 ntBASIC17.02■□□□□ 0.32
CLCN3P51790 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCN3P51790 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
CLCN3P51790 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN3P51790 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN3P51790 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CLCN3P51790 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN3P51790 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CLCN3P51790 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CLCN3P51790 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLCN3P51790 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCN3P51790 KLF2P2-201ENST00000416807 1039 ntBASIC17.01■□□□□ 0.31
CLCN3P51790 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms