Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB28P51157 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RAB28P51157 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RAB28P51157 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB28P51157 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
RAB28P51157 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB28P51157 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB28P51157 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB28P51157 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB28P51157 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB28P51157 GAPDHP40-201ENST00000505218 1006 ntBASIC15.01□□□□□ -0.01
RAB28P51157 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.01□□□□□ -0.01
RAB28P51157 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 AL596325.1-201ENST00000563991 1082 ntBASIC15.01□□□□□ -0.01
RAB28P51157 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB28P51157 AC093813.1-201ENST00000605066 256 ntBASIC15.01□□□□□ -0.01
RAB28P51157 WFDC1-204ENST00000613603 549 ntBASIC15.01□□□□□ -0.01
RAB28P51157 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
RAB28P51157 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 AL645728.2-202ENST00000641679 227 ntBASIC15.01□□□□□ -0.01
RAB28P51157 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB28P51157 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB28P51157 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB28P51157 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB28P51157 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 API5-202ENST00000420461 2009 ntTSL 2 BASIC15□□□□□ -0.01
RAB28P51157 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RAB28P51157 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15□□□□□ -0.01
RAB28P51157 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15□□□□□ -0.01
RAB28P51157 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 COPE-202ENST00000349893 948 ntTSL 2 BASIC15□□□□□ -0.01
RAB28P51157 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15□□□□□ -0.01
RAB28P51157 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15□□□□□ -0.01
RAB28P51157 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 C1QBPP1-201ENST00000400117 770 ntBASIC15□□□□□ -0.01
RAB28P51157 SOCS2P1-201ENST00000417727 557 ntBASIC15□□□□□ -0.01
RAB28P51157 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15□□□□□ -0.01
RAB28P51157 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15□□□□□ -0.01
RAB28P51157 AL359711.2-201ENST00000563105 872 ntBASIC15□□□□□ -0.01
RAB28P51157 AC124283.3-201ENST00000570869 594 ntBASIC15□□□□□ -0.01
RAB28P51157 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15□□□□□ -0.01
RAB28P51157 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 AC239800.4-201ENST00000603712 296 ntBASIC15□□□□□ -0.01
RAB28P51157 AC107373.2-201ENST00000607735 490 ntBASIC15□□□□□ -0.01
RAB28P51157 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15□□□□□ -0.01
RAB28P51157 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RAB28P51157 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RAB28P51157 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15□□□□□ -0.01
RAB28P51157 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15□□□□□ -0.01
RAB28P51157 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB28P51157 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms