Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF144AP50876 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.57□□□□□ -0.08
RNF144AP50876 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 KLF2P3-201ENST00000451977 1087 ntBASIC14.57□□□□□ -0.08
RNF144AP50876 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF144AP50876 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF144AP50876 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.57□□□□□ -0.08
RNF144AP50876 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 AC025678.2-201ENST00000562061 970 ntBASIC14.57□□□□□ -0.08
RNF144AP50876 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.57□□□□□ -0.08
RNF144AP50876 AC097359.3-201ENST00000603982 1210 ntBASIC14.57□□□□□ -0.08
RNF144AP50876 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF144AP50876 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RNF144AP50876 FO538757.1-201ENST00000623083 1397 ntBASIC14.57□□□□□ -0.08
RNF144AP50876 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RNF144AP50876 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RNF144AP50876 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RNF144AP50876 FAM86GP-201ENST00000448322 971 ntBASIC14.56□□□□□ -0.08
RNF144AP50876 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 IGHV3-42-201ENST00000520410 361 ntBASIC14.56□□□□□ -0.08
RNF144AP50876 AL512356.2-201ENST00000546955 174 ntBASIC14.56□□□□□ -0.08
RNF144AP50876 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF144AP50876 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF144AP50876 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF144AP50876 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 AL035456.1-201ENST00000456064 1369 ntBASIC14.56□□□□□ -0.08
RNF144AP50876 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 C18orf15-201ENST00000623680 2534 ntBASIC14.56□□□□□ -0.08
RNF144AP50876 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.56□□□□□ -0.08
RNF144AP50876 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.56□□□□□ -0.08
RNF144AP50876 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.56□□□□□ -0.08
RNF144AP50876 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF144AP50876 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF144AP50876 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF144AP50876 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RNF144AP50876 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms