Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.11■□□□□ 0.33
CPT1AP50416 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 AC022616.1-201ENST00000518688 554 ntBASIC17.11■□□□□ 0.33
CPT1AP50416 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.11■□□□□ 0.33
CPT1AP50416 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.11■□□□□ 0.33
CPT1AP50416 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.11■□□□□ 0.33
CPT1AP50416 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.11■□□□□ 0.33
CPT1AP50416 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.11■□□□□ 0.33
CPT1AP50416 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPT1AP50416 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.11■□□□□ 0.33
CPT1AP50416 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 AC112504.1-201ENST00000623415 1841 ntBASIC17.1■□□□□ 0.33
CPT1AP50416 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.1■□□□□ 0.33
CPT1AP50416 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.1■□□□□ 0.33
CPT1AP50416 BX284668.4-201ENST00000453917 508 ntBASIC17.1■□□□□ 0.33
CPT1AP50416 SAMD11P1-201ENST00000571429 661 ntBASIC17.1■□□□□ 0.33
CPT1AP50416 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.1■□□□□ 0.33
CPT1AP50416 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.1■□□□□ 0.33
CPT1AP50416 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.1■□□□□ 0.33
CPT1AP50416 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CPT1AP50416 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPT1AP50416 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
CPT1AP50416 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CPT1AP50416 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CPT1AP50416 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.09■□□□□ 0.33
CPT1AP50416 FNTAP2-201ENST00000430308 634 ntBASIC17.09■□□□□ 0.33
CPT1AP50416 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.09■□□□□ 0.33
CPT1AP50416 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.09■□□□□ 0.33
CPT1AP50416 AC126915.1-201ENST00000522847 1038 ntBASIC17.09■□□□□ 0.33
CPT1AP50416 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 ACTG1P17-201ENST00000558391 1119 ntBASIC17.09■□□□□ 0.33
CPT1AP50416 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 RN7SL713P-201ENST00000582127 302 ntBASIC17.09■□□□□ 0.33
CPT1AP50416 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.09■□□□□ 0.33
CPT1AP50416 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.09■□□□□ 0.33
CPT1AP50416 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.09■□□□□ 0.33
CPT1AP50416 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.09■□□□□ 0.33
CPT1AP50416 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPT1AP50416 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.09■□□□□ 0.33
CPT1AP50416 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CPT1AP50416 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms