Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.37■□□□□ 0.37
TM4SF4P48230 LYPLA2P1-203ENST00000447689 696 ntBASIC17.37■□□□□ 0.37
TM4SF4P48230 RPL18AP3-201ENST00000462885 528 ntBASIC17.37■□□□□ 0.37
TM4SF4P48230 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.37■□□□□ 0.37
TM4SF4P48230 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.37■□□□□ 0.37
TM4SF4P48230 ALG1L6P-201ENST00000515248 758 ntBASIC17.37■□□□□ 0.37
TM4SF4P48230 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.37■□□□□ 0.37
TM4SF4P48230 AC009884.2-201ENST00000603110 324 ntBASIC17.37■□□□□ 0.37
TM4SF4P48230 AC138696.2-201ENST00000607376 223 ntBASIC17.37■□□□□ 0.37
TM4SF4P48230 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TM4SF4P48230 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.37■□□□□ 0.37
TM4SF4P48230 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 AL133373.2-201ENST00000623187 2828 ntBASIC17.37■□□□□ 0.37
TM4SF4P48230 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.37■□□□□ 0.37
TM4SF4P48230 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.37■□□□□ 0.37
TM4SF4P48230 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.37■□□□□ 0.37
TM4SF4P48230 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF4P48230 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TM4SF4P48230 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.36■□□□□ 0.37
TM4SF4P48230 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TM4SF4P48230 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.36■□□□□ 0.37
TM4SF4P48230 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 PHBP15-201ENST00000574228 665 ntBASIC17.36■□□□□ 0.37
TM4SF4P48230 AP001527.2-201ENST00000614441 631 ntBASIC17.36■□□□□ 0.37
TM4SF4P48230 AC138466.4-201ENST00000623965 852 ntBASIC17.36■□□□□ 0.37
TM4SF4P48230 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.36■□□□□ 0.37
TM4SF4P48230 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF4P48230 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TM4SF4P48230 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TM4SF4P48230 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
TM4SF4P48230 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.35■□□□□ 0.37
TM4SF4P48230 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 AC136759.1-202ENST00000530858 2194 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TM4SF4P48230 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.35■□□□□ 0.37
TM4SF4P48230 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.35■□□□□ 0.37
TM4SF4P48230 AL627422.1-201ENST00000434104 580 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.35■□□□□ 0.37
TM4SF4P48230 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.35■□□□□ 0.37
TM4SF4P48230 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 CHCHD2P9-201ENST00000461726 456 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 ALG1L13P-202ENST00000519320 584 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 LINC01783-202ENST00000614408 828 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 BX284668.2-205ENST00000619677 828 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 AC092299.1-201ENST00000632679 757 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TM4SF4P48230 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TM4SF4P48230 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 REXO1L5P-201ENST00000622260 2098 ntBASIC17.35■□□□□ 0.37
TM4SF4P48230 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF4P48230 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms