Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MMP13P45452 FGD5P1-202ENST00000614866 2498 ntBASIC16.25■□□□□ 0.19
MMP13P45452 AC018892.3-201ENST00000623986 2499 ntBASIC16.25■□□□□ 0.19
MMP13P45452 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP13P45452 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
MMP13P45452 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 RPL37AP1-201ENST00000412502 279 ntBASIC16.25■□□□□ 0.19
MMP13P45452 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.25■□□□□ 0.19
MMP13P45452 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.25■□□□□ 0.19
MMP13P45452 AL450472.2-201ENST00000603663 1156 ntBASIC16.25■□□□□ 0.19
MMP13P45452 AC106028.4-201ENST00000614509 607 ntBASIC16.25■□□□□ 0.19
MMP13P45452 AL138828.2-201ENST00000615812 383 ntBASIC16.25■□□□□ 0.19
MMP13P45452 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP13P45452 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MMP13P45452 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 AC009090.5-201ENST00000624886 2285 ntBASIC16.25■□□□□ 0.19
MMP13P45452 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
MMP13P45452 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
MMP13P45452 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.25■□□□□ 0.19
MMP13P45452 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP13P45452 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MMP13P45452 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.24■□□□□ 0.19
MMP13P45452 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 MIR943-201ENST00000401286 94 ntBASIC16.24■□□□□ 0.19
MMP13P45452 FO393414.2-201ENST00000405153 598 ntBASIC16.24■□□□□ 0.19
MMP13P45452 AZGP1P1-201ENST00000411909 902 ntBASIC16.24■□□□□ 0.19
MMP13P45452 TREML5P-201ENST00000421694 576 ntBASIC16.24■□□□□ 0.19
MMP13P45452 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 PHKG1P2-201ENST00000457537 863 ntBASIC16.24■□□□□ 0.19
MMP13P45452 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP13P45452 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP13P45452 DUX4L27-201ENST00000554796 1261 ntBASIC16.24■□□□□ 0.19
MMP13P45452 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP13P45452 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP13P45452 MROH4P-201ENST00000431302 1578 ntBASIC16.24■□□□□ 0.19
MMP13P45452 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MMP13P45452 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP13P45452 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP13P45452 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MMP13P45452 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 NORAD-201ENST00000565493 5339 ntBASIC16.23■□□□□ 0.19
MMP13P45452 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MMP13P45452 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
MMP13P45452 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.23■□□□□ 0.19
MMP13P45452 SERBP1P3-201ENST00000459980 809 ntBASIC16.23■□□□□ 0.19
MMP13P45452 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP13P45452 AC027369.6-201ENST00000525520 931 ntBASIC16.23■□□□□ 0.19
MMP13P45452 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MMP13P45452 AL158211.3-201ENST00000607385 239 ntBASIC16.23■□□□□ 0.19
MMP13P45452 TEX28P1-201ENST00000613479 1221 ntBASIC16.23■□□□□ 0.19
MMP13P45452 TEX28P2-201ENST00000617764 1221 ntBASIC16.23■□□□□ 0.19
MMP13P45452 AC093512.1-201ENST00000617969 520 ntBASIC16.23■□□□□ 0.19
MMP13P45452 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms