Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.66□□□□□ -0.22
GDNFP39905 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GDNFP39905 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GDNFP39905 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 KRT18P3-201ENST00000451602 1288 ntBASIC13.66□□□□□ -0.22
GDNFP39905 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
GDNFP39905 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.66□□□□□ -0.22
GDNFP39905 AC027601.4-201ENST00000611259 610 ntBASIC13.66□□□□□ -0.22
GDNFP39905 AC007064.4-201ENST00000637740 555 ntBASIC13.66□□□□□ -0.22
GDNFP39905 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 AL137784.3-201ENST00000623858 2288 ntBASIC13.66□□□□□ -0.22
GDNFP39905 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.66□□□□□ -0.22
GDNFP39905 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.65□□□□□ -0.22
GDNFP39905 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GDNFP39905 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.65□□□□□ -0.22
GDNFP39905 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 RNA5SP416-201ENST00000516838 111 ntBASIC13.65□□□□□ -0.22
GDNFP39905 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
GDNFP39905 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.65□□□□□ -0.22
GDNFP39905 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.65□□□□□ -0.22
GDNFP39905 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.65□□□□□ -0.22
GDNFP39905 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.65□□□□□ -0.22
GDNFP39905 AL365330.1-201ENST00000607459 531 ntBASIC13.65□□□□□ -0.22
GDNFP39905 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GDNFP39905 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GDNFP39905 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
GDNFP39905 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDNFP39905 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms