Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 CICP11-201ENST00000434745 2827 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCLP35914 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGCLP35914 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCLP35914 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCLP35914 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCLP35914 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 AC026410.3-201ENST00000514280 936 ntBASIC15.48■□□□□ 0.07
HMGCLP35914 AC190387.1-201ENST00000551683 408 ntBASIC15.48■□□□□ 0.07
HMGCLP35914 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGCLP35914 MIR3197-201ENST00000582241 73 ntBASIC15.48■□□□□ 0.07
HMGCLP35914 AC138761.1-201ENST00000584393 385 ntBASIC15.48■□□□□ 0.07
HMGCLP35914 AL049840.4-201ENST00000602422 811 ntBASIC15.48■□□□□ 0.07
HMGCLP35914 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HMGCLP35914 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCLP35914 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCLP35914 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCLP35914 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HMGCLP35914 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
HMGCLP35914 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HMGCLP35914 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HMGCLP35914 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCLP35914 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 AC104457.1-201ENST00000401024 814 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 GHSR-202ENST00000427970 912 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 CRB3P1-201ENST00000449338 276 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.47■□□□□ 0.07
HMGCLP35914 AC092552.1-201ENST00000547243 906 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCLP35914 AC140912.1-201ENST00000577171 1054 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 SPDYE22P-201ENST00000582158 798 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.47■□□□□ 0.07
HMGCLP35914 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCLP35914 AC023157.3-201ENST00000619086 2088 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 1072.4 ms